BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B09LP1|AL428855
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig605 1690 0.0
>3x_Contig605
Length = 2275
Score = 1690 bits (852), Expect = 0.0
Identities = 860/862 (99%), Gaps = 1/862 (0%)
Strand = Plus / Minus
Query: 1 gatctatatctttgtgtttgctgatattttgcttcgtcgaatctatagcggagatatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 gatctatatctttgtgtttgctgatattttgcttcgtcgaatctatagcggagatatttt 1959
Query: 61 ttttgccattttaatacttatagacgaaagtcaatactgaagactcccagttgctccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 ttttgccattttaatacttatagacgaaagtcaatactgaagactcccagttgctccaag 1899
Query: 121 cttttgatagtttcaatatcagttttgcaggtgttcagttcctgctctttgtttggttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 cttttgatagtttcaatatcagttttgcaggtgttcagttcctgctctttgtttggttgt 1839
Query: 181 tatgccatcaggttacttgacctgggttcccgttagctgtcctttttatctcatacttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1838 tatgccatcaggttacttgacctgggttcccgttagctgtcctttttatctcatacttag 1779
Query: 241 ggagggaaacggaaatagtgtggttttcacttccacaaaattatagatctgattcaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 ggagggaaacggaaatagtgtggttttcacttccacaaaattatagatctgattcaataa 1719
Query: 301 ttgttcttaatataaatcagcgccgaaactgtgatcgcctttggagaagagctttttaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 ttgttcttaatataaatcagcgccgaaactgtgatcgcctttggagaagagctttttaaa 1659
Query: 361 caattcgcaacagtattctttgcagcattcgtcaactctttgttgctcattgtcattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 caattcgcaacagtattctttgcagcattcgtcaactctttgttgctcattgtcattatt 1599
Query: 421 attgaatttyttctttctttttgggttttcagcattttcattatactactattggataaa 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 attgaattttttctttctttttgggttttcagcattttcattatactactattggataaa 1539
Query: 481 attacgttactgaagacatccaagctagtcaaccatttaaattagagaaagttattgcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 attacgttactgaagacatccaagctagtcaaccatttaaattagagaaagttattgcca 1479
Query: 541 atagtcgctttgctacctctaacgcttttggaatattatcaagatttctgtattttttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 atagtcgctttgctacctctaacgcttttggaatattatcaagatttctgtattttttgg 1419
Query: 601 caaaatagtggagttgtttccctttttaaaagtcagctgctaa-ctataagtaatacaca 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1418 caaaatagtggagttgtttccctttttaaaagtcagctgctaagctataagtaatacaca 1359
Query: 660 tcactcgctcctgaaacaactgctttttgcttcttttgaaaggactaatacatctagttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 tcactcgctcctgaaacaactgctttttgcttcttttgaaaggactaatacatctagttt 1299
Query: 720 caggattcctccttttcaacgccaacatagagattccttaccttaatttttctgaaatct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 caggattcctccttttcaacgccaacatagagattccttaccttaatttttctgaaatct 1239
Query: 780 gtgcgttctgcatctccttcagccttgtattgattcctctcaacttcttttctttttttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 gtgcgttctgcatctccttcagccttgtattgattcctctcaacttcttttctttttttt 1179
Query: 840 aagggtattgttctattgagac 861
||||||||||||||||||||||
Sbjct: 1178 aagggtattgttctattgagac 1157
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8519
Number of Sequences: 1807
Number of extensions: 8519
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)